FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831570

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831570
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12844921
Sequences flagged as poor quality0
Sequence length53-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG93150.010.176217120
TAGATCT405200.09.150212120
ATCTCGG357350.08.86446120
AGATCTC388050.08.688819120
TCGGTGG295700.08.663406120
AGTGTAG555350.08.5343895120
AGAGTGT641900.08.505232120
CTCGGTG317000.08.44088120
GTGTAGA536800.08.426961120
TCTCGGT322900.08.305229120
GATCTCG396300.08.280858120
GTAGATC527550.08.176688120
TGTAGAT564450.08.056675120
GTGGTCG226600.08.022225120
GGTGGTC252250.07.991351120
TGGTCGC203500.07.9599714120
GAGTGTA594050.07.756224120
AAGAGTG704700.07.7557936120
TAGGGAA1017200.07.5022736120
CGGTGGT292650.07.298164120
Produced by FastQC (version 0.11.5)