FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16801830
Sequences flagged as poor quality0
Sequence length55-126
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1881550.014.174651120
TCTCGGG24400.014.019712120
CGTATCA925500.011.166339120
CGCCGTA1174300.011.013422120
GCGTCGG67050.010.91981120
CCGTATC1020950.010.780748120
GCCGTAT1094850.010.645074120
GGTCGCC1513250.010.279652120
GTATCAT913300.010.218121120
GTCGCCG1406650.010.196847120
TCGCCGT1318350.010.115035120
TGGTCGC1654600.09.945543120
GTGGTCG1797150.09.700986120
ATCATTA855400.09.569719120
TCATTAA762450.09.256568120
GGTGGTC1949400.09.174225120
CATTAAA718050.09.168663120
TATCATT999300.08.918352120
CGGTGGT2115850.08.824075120
GGGGCCG9151.6743901E-58.5242231
Produced by FastQC (version 0.11.5)