FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831578

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831578
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14910454
Sequences flagged as poor quality0
Sequence length61-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTAGGG370250.08.312318120
AGCGTCG594650.07.8188120
TCGTGTA471900.07.7676754120
GTAGGGA347450.07.718182120
GTGTAGG416050.07.5991483120
CGTGTAG434750.07.5344734120
TAGGGAA345300.07.3666344120
GTCGTGT485100.07.3213353120
GCGTCGT556550.07.31923120
CGTCGTG526500.07.212821120
GTAGATC208400.07.1968446120
GAGTGTA214150.07.1716933120
GAGCGTC651350.07.138174120
TAGATCG261450.06.9985976120
AGTGTAG195150.06.9784207120
AGAGTGT242500.06.852797120
AGAGCGT713200.06.805139120
AGATCTC161800.06.7111955120
AAGAGCG758350.06.668954120
GTGTAGA210700.06.548821120
Produced by FastQC (version 0.11.5)