FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14526544
Sequences flagged as poor quality0
Sequence length52-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT280350.09.596365120
AGTGTAG377800.08.408587120
GTGTAGA384050.08.005925120
AGAGTGT446300.07.9522476120
GCGTCGG67850.07.7886496120
ATCTCGG256400.07.775877120
GTAGGGA721000.07.7709785120
GTGGTCG160300.07.7547197120
GAGTGTA405650.07.7276664120
AGATCTC292750.07.712946120
AAGAGTG517000.07.65463120
GTAGATC390250.07.494029120
GGTGGTC194800.07.4602904120
TCGGTGG222100.07.273326120
GATCTCG295750.07.228606120
GGGAAAG690650.07.2168784120
TAGGGAA692750.07.1689954120
TGTAGAT446300.06.9969015120
TGTAGGG765100.06.938465120
CGTGTAG872950.06.927387120
Produced by FastQC (version 0.11.5)