FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14005597
Sequences flagged as poor quality0
Sequence length56-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG95000.09.410434120
TAGATCT379650.08.360249120
AGTGTAG503150.08.192307120
CTCGGTG312550.08.081827120
TGGTCGC208900.07.984603120
TCGGTGG289850.07.88676120
TCTCGGT318800.07.866924120
GTGTAGA494450.07.7782626120
ATCTCGG347700.07.7652383120
GTAGATC515450.07.740732120
AGATCTC382150.07.7403398120
AAGAGTG637950.07.627482120
GTGGTCG227900.07.608525120
AGAGTGT577850.07.507065120
GAGTGTA536650.07.3902187120
TGTAGAT525500.07.2958364120
GATCTCG397800.07.239747120
GGTGGTC255500.06.9979744120
TAGGGAA889100.06.8360586120
TGTAGGG981650.06.772204120
Produced by FastQC (version 0.11.5)