FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831612

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831612
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13696871
Sequences flagged as poor quality0
Sequence length53-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT308400.010.23546120
AGATCTC304050.09.867746120
GAGTGTA489550.09.555314120
AGAGTGT534950.09.553625120
AGTGTAG448850.09.497459120
GTGTAGA439750.09.133411120
AAGAGTG605350.08.8597355120
TCTCGGT260900.08.826471120
GTAGATC458900.08.726068120
GATCTCG305600.08.401115120
TAGGGAA893200.08.27978120
ATCTCGG284500.08.178829120
CTCGGTG254650.08.122266120
TGTAGAT464400.08.001266120
GCGTCGG103650.07.773166120
GTAGGGA933900.07.616005118-119
CGTGTAG1141350.07.6016855120
TGTAGGG994700.07.579976120
AGGGAAA924050.07.560893120
TCGGTGG260000.07.4926267120
Produced by FastQC (version 0.11.5)