FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15316252
Sequences flagged as poor quality0
Sequence length50-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1325950.011.557862120
GCGTCGG93950.09.46366120
TCATTAA452300.08.752922120
CCGTATC632950.08.675031120
GCCGTAT677050.08.642362120
TGGTCGC880750.08.546585120
CGTATCA557750.08.530604120
CGCCGTA711550.08.451286120
ATCATTA517600.08.321835120
GGTCGCC835850.08.286959120
GTATCAT571600.08.029627120
TATCATT621850.07.8831306120
GTCGCCG826450.07.8360357120
GTGGTCG947200.07.693311120
TCGGTGG1175350.07.554425120
GGTGGTC1018200.07.493157120
TCGCCGT796200.07.4487977118-119
CGGTGGT1117350.07.306753120
CATTAAA451350.07.0410337120
CTCGGTG1247600.07.039895120
Produced by FastQC (version 0.11.5)