FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831634

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831634
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13691699
Sequences flagged as poor quality0
Sequence length126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA862700.09.861907120
CGTATCA300800.08.477262120
GGTCGCC483500.08.425929120
TGGTCGC475650.08.249635120
GGTGGTC567550.08.097838120
CGGTGGT623050.07.8772545120
TCGGTGG655800.07.712597120
GTGGTCG531750.07.706509120
CCGTATC366950.07.619448120
TCTCGGT732400.07.610477120
GCCGTAT381650.07.4674587120
GTATCAT326050.07.415925120
CTCGGTG706450.07.405929120
ATCTCGG789550.07.378772120
TAGATCT885050.07.328285120
CGCCGTA407600.07.2570014120
AGATCTC846900.07.226242120
AGTGTAG1141250.07.1289144120
GATCTCG845000.07.0649786120
TCGCCGT485450.06.8842273120
Produced by FastQC (version 0.11.5)