FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831646

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831646
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13644717
Sequences flagged as poor quality0
Sequence length54-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA558650.010.171363120
GTGGTCG414650.08.219316120
TGGTCGC385350.08.065724120
GGTGGTC445750.07.9823785120
TCTCGGT580000.07.8106637120
ATCTCGG626100.07.7626553120
CGTATCA245600.07.720185120
GGTCGCC381400.07.708757120
CTCGGTG560200.07.701135120
GATCTCG660000.07.7003145120
TAGATCT688500.07.477429120
AGATCTC672000.07.340002118-119
TCGGTGG522700.07.2893734120
CGGTGGT512550.07.211298120
GCCGTAT325050.07.06997120
CCGTATC300750.07.062632120
GTATCAT258450.07.057746120
GTAGATC850600.07.040024120
AGTGTAG894500.07.0030804120
CGCCGTA348250.06.943571120
Produced by FastQC (version 0.11.5)