FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831652

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831652
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12957995
Sequences flagged as poor quality0
Sequence length55-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT341500.08.275226120
CTCGGTG272250.08.088124120
AGTGTAG450250.08.008854120
GATCTCG331200.07.898521120
GTGGTCG194950.07.8789144120
GGTCGCC180350.07.851371120
AGATCTC341600.07.745873120
TCTCGGT284300.07.7453103120
AGAGTGT526100.07.6867228120
GTGTAGA446250.07.5966105120
ATCTCGG303350.07.456705120
GCGTCGG63550.07.364253120
TCGGTGG260750.07.340337120
GAGTGTA480150.07.2976923120
GGTGGTC219100.07.2021637120
TGGTCGC178350.07.1656585120
GTAGATC444900.06.9588413120
TGTAGAT492600.06.8087444120
AAGAGTG576250.06.788695120
TAGGGAA764100.06.517447120
Produced by FastQC (version 0.11.5)