FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831656

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831656
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14778665
Sequences flagged as poor quality0
Sequence length61-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT290450.09.737585120
AGATCTC290200.08.918291120
GAGTGTA417800.08.580402120
AGTGTAG393550.08.57508120
TGGTCGC146500.08.48466120
AGAGTGT461150.08.294667120
ATCTCGG247850.08.285886120
GTGTAGA392150.08.284128120
GTAGATC384200.08.142957120
TCGGTGG214300.08.069973120
CTCGGTG224650.07.9387445120
GATCTCG290750.07.910079120
TCTCGGT230000.07.760514118-119
TAGGGAA724250.07.7439075120
GGTGGTC184600.07.676832120
TGTAGGG807100.07.581386120
AAGAGTG516050.07.4006033120
GTAGGGA753050.07.344083120
GTGGTCG163950.07.215336120
CGTGTAG915200.07.053331120
Produced by FastQC (version 0.11.5)