FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831658

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831658
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11128048
Sequences flagged as poor quality0
Sequence length58-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTC325500.08.681233120
TAGATCT330300.08.591403120
GATCTCG325350.08.482396120
GGTGGTC214650.08.2172785120
TCGGTGG253050.07.9897847120
GTGGTCG191500.07.9888253120
TCTCGGT276000.07.955794120
AGTGTAG441000.07.9312468120
GAGTGTA475800.07.6916037120
GTGTAGA434600.07.647712120
ATCTCGG299350.07.635847120
CTCGGTG266700.07.625849120
AGAGTGT507650.07.5044837120
GTAGATC439450.07.4677434120
GGTCGCC186150.07.3482394120
AAGAGTG557050.07.2590075120
TGGTCGC176050.07.173458118-119
TGTAGAT453600.06.811546120
GTAGGGA793450.06.7219257120
GTGTAGG900800.06.693437120
Produced by FastQC (version 0.11.5)