FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831670

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831670
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11862904
Sequences flagged as poor quality0
Sequence length62-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA707700.011.793136120
GCGTCGG79050.08.956359120
CGTATCA303000.08.613864120
TGGTCGC461200.08.183003120
GTATCAT318000.08.056606120
GTGGTCG498900.07.949491120
GGTCGCC451200.07.898938120
CCGTATC367850.07.731414120
TCATTAA225100.07.7299004120
GCCGTAT378700.07.636654120
GTCGCCG470150.07.478466120
CATTAAA239750.07.307614120
CGGTGGT614100.07.278947120
CGCCGTA405150.07.2417645120
GGTGGTC548200.07.179863120
ATCATTA273350.07.177613120
TCTCGGT695900.07.138959120
TCGGTGG626050.07.015416120
TATCATT337250.06.938475120
ATCTCGG750750.06.9050965120
Produced by FastQC (version 0.11.5)