FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831690

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831690
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14815148
Sequences flagged as poor quality0
Sequence length52-126
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1126650.012.489318120
GCGTCGG144000.010.917513120
TCATTAA386000.08.79861120
GCCGTAT619750.08.249127120
CCGTATC583600.08.2048855120
CGTATCA490050.08.142657120
GTATCAT489600.08.137886120
ATCATTA433050.08.119784120
TGGTCGC801900.07.9766746120
GGTCGCC787850.07.966601120
TATCATT511300.07.67515120
GTGGTCG878750.07.647819120
CGCCGTA672350.07.5680733120
GGTGGTC936900.07.3652844120
CATTAAA376550.07.362143120
TCGGTGG1069900.07.2012315120
GTCGCCG819400.07.169216120
CTCGGTG1141750.07.1369667120
CGGTGGT1023500.06.9883285120
TAGATCT1435800.06.954154120
Produced by FastQC (version 0.11.5)