FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831716

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831716
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12424939
Sequences flagged as poor quality0
Sequence length69-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCCAC35750.017.1255071
GATCCAT42450.015.9779131
GATCCTG62700.015.5083921
GATCCAG62550.015.1617421
GATCCTA16150.014.4947731
GATCCAA29600.013.99191
GATCCTT41750.013.8017471
GATCCTC47500.012.7628341
GATCTTA34450.012.5447661
GATCTCA43750.011.9360471
GATCCGG76100.011.7522481
AGTGTAG317150.010.8960495120
GATCTTG68750.010.73871
GATCTCT40950.010.55353451
GATCATA42350.010.4881191
GATCCGT43100.010.4448771
TAGATCT212650.010.410516120
GATCTAT34650.010.3936321
GATCTTT66550.010.3721571
GAGTGTA349800.010.239195120
Produced by FastQC (version 0.11.5)