FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831720

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831720
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12465560
Sequences flagged as poor quality0
Sequence length56-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC192850.010.203292120
TAGATCT407950.09.146808120
GTGGTCG216550.09.086608120
AGATCTC397000.09.0213175120
GCGTCGG64100.08.9846115120
ATCTCGG357250.08.93358120
TCTCGGT329200.08.820063120
AGTGTAG564450.08.778913120
GATCTCG389800.08.618512120
TCGGTGG296100.08.610664120
GGTGGTC248100.08.366339120
GTGTAGA543800.08.306955120
GTAGATC539550.08.294559120
GGTCGCC195500.08.22383120
GAGTGTA604500.08.058345120
CTCGGTG319400.08.001305120
AAGAGTG721500.07.7992463120
AGAGTGT653150.07.706109120
GTCGCCG212750.07.585231120
CGCCGTA187250.07.5289106120
Produced by FastQC (version 0.11.5)