FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17438155
Sequences flagged as poor quality0
Sequence length52-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGTAG215950.09.142927120
TAGATCT163350.08.780542120
GTGTAGA228400.08.486898120
TAGGGAA433950.08.380608120
GAGTGTA236900.08.30905120
GTAGATC236350.08.176037120
AGAGTGT260700.07.987871120
GTAGGGA442650.07.8498373120
GTGTAGG520300.07.7740736120
TGTAGGG473700.07.6266823120
GTCGTGT626850.07.62065120
AAGAGTG307300.07.44055120
CGTGTAG550700.07.23595120
TCGTGTA586100.07.147041120
AGCGTCG793000.07.075889120
CGTCGTG712050.07.054359120
AGATCTC176250.06.980191120
TGTAGAT273500.06.8460464120
GCGTCGT761150.06.5581837118-119
AAGAGCG965800.06.381545120
Produced by FastQC (version 0.11.5)