FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14125140
Sequences flagged as poor quality0
Sequence length52-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1127950.012.100729120
CGTATCA474600.09.114388120
TCATTAA395100.08.989483120
GTATCAT480950.08.981576120
GTGATCA54750.08.7667711
GCCGTAT579650.08.570072120
GTGCACA43300.08.4523171
CATTAAA383200.08.39188120
CCGTATC534150.08.379066120
GTGCAAC55450.08.3314971
GTGTACG43450.08.2850531
CGCCGTA621050.08.230629120
GTGTTCA90550.08.21612551
TGGTCGC766250.08.189949120
GGTCGCC736200.08.092327120
GTGGTCG831500.08.073983120
GTGCAAA125300.08.0443711
GTGCAAG75400.07.8776681
ATCATTA441450.07.868955120
GTGTTCG68650.07.86567161
Produced by FastQC (version 0.11.5)