FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831768

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831768
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15541707
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCCGATC95350.016.9262263
CCGATCT99150.015.6718484
CTTCCGA127750.014.4651361
CGATCTA29700.013.7361695
AAAAAAA2109500.013.389675120
TTCCGAT175600.010.5234692
GCGTCGG112300.09.562829120
TCATTAA693450.08.96309120
GTATCAT843500.08.961869120
CGTATCA870800.08.894489120
ATCATTA768900.08.887242120
TCTCGGG40450.08.750777120
CGCCGTA1135250.08.492538120
CCGTATC981700.08.4825120
CATTAAA679600.08.430691120
GGTCGCC1354400.08.416272120
GCCGTAT1058100.08.397335120
TATCATT891000.08.356169120
TGGTCGC1429750.08.346182120
GTCGCCG1339200.08.162367120
Produced by FastQC (version 0.11.5)