FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831770

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831770
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10994738
Sequences flagged as poor quality0
Sequence length126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTGGTC236650.010.140801120
GGTCGCC179250.09.4720955120
GTGGTCG202950.09.371065120
TGGTCGC186050.09.254885120
CTCGGTG290800.09.201512120
GCGTCGG36900.09.10501120
GTCGCCG173200.08.867698120
TCGGTGG289200.08.567824120
AGATCTC391200.08.342935120
GATCTCG365000.08.300749120
TCTCGGT316400.08.106221118-119
TAGATCT398200.07.9100065118-119
ATCTCGG346250.07.7106156120
AGAGTGT590950.07.6752024120
CGGTGGT288800.07.530601118-119
TCGCCGT192450.07.481904120
GTAGATC483700.07.305635120
AGTGTAG515950.07.1513214120
GAGTGTA548000.07.0615163120
CGCCGTA179350.06.957941120
Produced by FastQC (version 0.11.5)