FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831774

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831774
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15042393
Sequences flagged as poor quality0
Sequence length55-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAGGGG3651.8053192E-514.7939851
AAAAAAA2533150.014.357889120
CTAGGCA5951.2420638E-511.0920361
TCTCGGG34450.010.623709120
CTTGGAC42800.010.0930931
GCGTCGG114850.09.977872120
CGTATCA1089750.09.563316120
CTAGGGA5700.00114371129.4733421
CTTGGCA95150.09.4584081
GTATCAT1051700.09.213322120
CTTGGGG34200.08.9470451
CATTAAA840400.08.945416120
CCGTATC1212250.08.893884120
TCATTAA886900.08.814655120
CTTGGCG96800.08.8013341
GCCGTAT1296400.08.585003120
CTTGGAA135050.08.4410131
CTTGGGA52100.08.4066061
CTAGGTC7200.00101989438.3330331
CTTGGGT30400.08.2891741
Produced by FastQC (version 0.11.5)