FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831796

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831796
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13171338
Sequences flagged as poor quality0
Sequence length126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC213550.09.356125120
GTGGTCG239950.09.176914120
AGTGTAG600200.08.937023120
TCGGTGG322600.08.815873120
AGATCTC431350.08.735368120
ATCTCGG390050.08.721961120
TAGATCT441900.08.676173120
AAGAGTG776650.08.536666120
GTAGATC574200.08.516199120
TCTCGGT356700.08.511356120
GAGTGTA646650.08.480633120
CTCGGTG334550.08.465104120
GGTGGTC262500.08.434288120
GATCTCG428100.08.395237120
CGGTGGT311650.08.20151120
GTGTAGA579650.08.135946120
AGAGTGT700200.08.011999120
TGTAGAT606450.07.5785327120
GGTCGCC219550.07.570031120
AAAGAGT881950.06.9765344118-119
Produced by FastQC (version 0.11.5)