FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831820

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831820
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20837892
Sequences flagged as poor quality0
Sequence length58-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT503300.07.872411120
TGGTCGC301350.07.3908334120
AGATCTC507550.07.3333697120
CTCGGTG427250.07.180084120
AGTGTAG650150.07.1469064120
GGTCGCC309700.06.9783387120
GTGGTCG325500.06.953141120
ATCTCGG473750.06.944197120
GATCTCG508350.06.601455120
GGTGGTC363550.06.5391574120
GAGTGTA692350.06.5292006120
TCTCGGT436900.06.513089120
GTAGATC667250.06.501089118-119
AGAGTGT739800.06.4999332120
GTGTAGA652950.06.4634757120
TCGGTGG426950.06.2149267120
GTAGGGA1075100.06.08651120
AAGAGTG815450.06.036806120
TAGGGAA1060300.05.905359120
GTCGCCG343050.05.809937120
Produced by FastQC (version 0.11.5)