FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831828

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831828
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13524805
Sequences flagged as poor quality0
Sequence length50-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG76000.015.472487120
AAAAAAA1172600.013.353905120
CCCCCCT9854.47435E-89.7470971
CGTATCA527350.09.556481120
CCGTATC609600.09.182361120
GGTCGCC812900.08.598178120
TGGTCGC857450.08.515289120
TCATTAA408500.08.488939120
GCCGTAT641050.08.479182120
GGTGGTC1016400.08.4291120
ATCATTA481200.08.415809120
GTATCAT533900.08.371707120
GTCGCCG791250.08.355752120
CGCCGTA679800.08.340043120
TCGCCGT758450.08.226669120
GTGGTCG927200.08.159421120
CATTAAA404950.08.089262120
TCTCGGG36850.07.652054120
CTCGGTG1248200.07.570317120
TCGGTGG1168900.07.56037120
Produced by FastQC (version 0.11.5)