FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831848

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831848
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16253259
Sequences flagged as poor quality0
Sequence length57-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT129300.09.004691120
GTAGGGA368550.08.77724120
TGTAGGG398850.08.57691120
GAGTGTA195450.08.505693120
AGTGTAG183950.08.352295120
AGAGTGT215050.08.121181120
TCGTGTA511250.07.994281120
CGTGTAG477850.07.9376345120
GTGTAGG443050.07.788982120
TAGGGAA361200.07.7262874118-119
GTAGATC204900.07.5568943120
AAGAGTG265200.07.49066120
GTCGTGT538850.07.3509197118-119
AGCGTCG678450.07.094506120
GAGCGTC741950.06.9564786120
GTGTAGA198300.06.9004555120
GCGTCGT644050.06.8956904120
AGAGCGT780750.06.8490663120
AGGGAAA460100.06.7568326120
GATCGGA1158900.06.649434120
Produced by FastQC (version 0.11.5)