FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831852

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831852
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15915128
Sequences flagged as poor quality0
Sequence length65-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA2284150.014.772063120
TCTCGGG31700.012.517939120
GCGTCGG93400.011.458328120
TCATTAA836500.010.134477120
CGTATCA1083000.010.08174120
GTATCAT1050850.09.955353120
CCGTATC1208550.09.845307120
GCCGTAT1311400.09.742533120
CGCCGTA1414600.09.711821120
CATTAAA800850.09.662188120
ATCATTA937050.09.618048120
GGTCGCC1751050.09.243249120
GTCGCCG1667400.09.097573120
TCGCCGT1562000.08.972415120
TATCATT1079600.08.893858120
TGGTCGC1873600.08.5295515120
GTGGTCG2015950.08.326908120
ATTAAAA964800.08.325634120
GGTGGTC2163100.08.210734120
CGGTGGT2326350.07.572525120
Produced by FastQC (version 0.11.5)