FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831856

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831856
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13543464
Sequences flagged as poor quality0
Sequence length51-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC302850.08.511319120
GGTGGTC359800.08.032506120
GGTCGCC298350.08.015381120
TCGGTGG411950.07.847022120
TAGATCT577450.07.7935367120
CTCGGTG452400.07.676661120
ATCTCGG509100.07.6596465120
GTGGTCG329550.07.5847125120
AGATCTC554500.07.5743046120
CGTATCA209350.07.462211120
GATCTCG544800.07.3672686120
TCTCGGT473050.07.115247118-119
GTCGCCG334150.06.9588366120
TGTAGAT761850.06.956107120
CGGTGGT401050.06.9366474120
GAGTGTA780750.06.787717120
GTGTAGA727500.06.780743120
AGTGTAG742200.06.7701454118-119
CGCCGTA288400.06.72937120
GCGTCGG87600.06.7218547120
Produced by FastQC (version 0.11.5)