FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16454530
Sequences flagged as poor quality0
Sequence length50-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTCAT151150.017.231211
GCGTCGG77850.014.979363120
CCTTCAC106500.014.2562451
CCTACAC44100.014.0162831
CCTCCAC66700.013.5858041
CATTACC135750.013.5274471
CCTCCAT92650.013.3430781
CCTGCAT150150.013.1093971
CCTTTAT201650.013.0944921
CCTTGAT145500.012.9509281
CCTACAT65450.012.5616051
CAATACC159650.012.4044991
CCTGCAC100750.012.2107711
CCTTACC76750.011.8850061
CATTGAT217300.011.7924051
CCTTGAC75950.011.773151
CCTTTAC141450.011.7095541
CCTCGAT70000.011.5736391
GGTGGTC979400.011.489364120
GGTCGCC734850.011.443773120
Produced by FastQC (version 0.11.5)