FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831870

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831870
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13583474
Sequences flagged as poor quality0
Sequence length51-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTGTAG392400.08.960067120
GCGTCGG80700.08.475668120
GTGTAGA385400.08.328843120
GTAGATC398050.08.260104120
GAGTGTA419050.08.189791120
GGTGGTC191050.08.03962120
TAGATCT285300.07.9283385120
TGGTCGC157900.07.7895856120
AGAGTGT458200.07.778108120
GTAGGGA739900.07.727918120
GTGGTCG170950.07.651208120
ATCTCGG259700.07.5778236120
GATCTCG290000.07.5515738120
TCTCGGT239450.07.542135120
TCGGTGG221800.07.466037120
CTCGGTG235550.07.4632344120
TGTAGGG794150.07.419106120
AAGAGTG509150.07.376854120
TAGGGAA705800.07.3532114120
AGATCTC282750.07.3103204118-119
Produced by FastQC (version 0.11.5)