FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831872

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831872
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13007984
Sequences flagged as poor quality0
Sequence length51-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG506900.08.900901120
AAAAAAA880600.08.864148120
GGTGGTC549000.08.535267120
CGTATCA310800.08.455348120
GGTCGCC462350.08.0715685120
TCGGTGG641950.08.037771120
TGGTCGC470100.07.8619995118-119
GCGTCGG104550.07.7472596120
CTCGGTG716150.07.716032120
AGATCTC860250.07.7138085120
CGGTGGT608150.07.695242120
GTATCAT314450.07.632148120
ATCATTA292400.07.551076120
CCGTATC383750.07.5359335120
TAGATCT898050.07.402487120
TCATTAA259550.07.374083120
CCGATCT62650.07.2780084
GTCGCCG514450.07.2657976120
ATCTCGG815350.07.181979120
TCTCGGT758050.07.040292118-119
Produced by FastQC (version 0.11.5)