FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831880

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831880
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15586417
Sequences flagged as poor quality0
Sequence length52-126
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG75450.012.189562120
AAAAAAA1379700.010.560971120
CGTATCA494050.09.052279120
GGTCGCC735900.09.0097475120
TGGTCGC780050.08.808048120
GTGGTCG840800.08.71499120
GGTGGTC913650.08.638548120
CCGTATC552800.08.557809120
CGGTGGT1012550.08.430004120
GCCGTAT592000.08.397301120
TCGGTGG1071850.08.367404120
GTCGCCG728400.08.351538120
CTCGGTG1152200.07.9247546120
CGCCGTA618900.07.891142118-119
TCGCCGT694350.07.696251120
GTATCAT529100.07.63462120
TCTCGGT1224600.07.539679120
CGATCTA20752.0008883E-117.5177595
CCGATCT78450.07.49490744
AGATCTC1476700.07.4737105120
Produced by FastQC (version 0.11.5)