FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831910

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831910
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12377628
Sequences flagged as poor quality0
Sequence length63-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA821050.012.15859120
CGTATCA354900.010.04107120
GTATCAT350500.09.157254120
TCATTAA273950.08.847277120
TGGTCGC598950.08.824393120
ATCATTA307150.08.808978120
GGTGGTC700500.08.727012120
GGTCGCC582400.08.683718120
GTGGTCG646100.08.653976120
CCGTATC422500.08.505495120
GCCGTAT473750.08.395834120
CGGTGGT779100.08.293198120
CGCCGTA519400.08.177694120
CATTAAA281900.08.172137120
GTCGCCG613850.08.033579120
TCTCGGT941850.08.013061120
TCGGTGG818350.07.946753120
AGATCTC1103450.07.839929120
CTCGGTG889050.07.6656976120
TATCATT369150.07.638261120
Produced by FastQC (version 0.11.5)