FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831922

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831922
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13235512
Sequences flagged as poor quality0
Sequence length50-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1314450.014.576495120
CGTATCA590550.09.622581120
TCATTAA462800.09.439224120
GTATCAT582200.09.348315120
CATTAAA432600.09.127201120
GCGTCGG121450.08.94292120
CCGTATC686500.08.8720455120
GCCGTAT733100.08.823762120
CGCCGTA786450.08.660101120
GTGGTCG1090850.08.6199120
ATCATTA530250.08.611964120
GGTCGCC966400.08.382529120
TGGTCGC1006300.08.139606120
GTCGCCG967100.08.115861120
TCGCCGT894850.08.006678120
TATCATT598100.07.8657565120
GGTGGTC1156150.07.712637120
TCGGTGG1336200.07.6703405120
CGGTGGT1257100.07.499022120
TCTCGGG47100.07.261933120
Produced by FastQC (version 0.11.5)