FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831948

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831948
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12339670
Sequences flagged as poor quality0
Sequence length66-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACGCTA22600.013.5394176
AAAAAAA945950.013.148282120
ACGCTAC27050.011.5338517
CGCTACT30300.010.2967218
TCATTAA351950.09.957819120
CGTATCA445350.09.772682120
ATCATTA401950.09.302401120
CCGTATC517800.09.067043120
GTATCAT437700.08.858494120
CATTAAA348400.08.765208120
GTGGTCG812150.08.704578120
TGGTCGC755550.08.680369120
TATCATT468950.08.627108120
AGGTACG34500.08.5215873
GGTCGCC723600.08.51534120
CGCCGTA625650.08.44567120
GCCGTAT567450.08.2843120
GGTGGTC878400.08.000163120
GTCGCCG751550.07.7187347120
TCGGTGG1010550.07.608331120
Produced by FastQC (version 0.11.5)