FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831960

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831960
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10928909
Sequences flagged as poor quality0
Sequence length53-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1170850.015.074481120
TCATTAA391550.09.775397120
GCGTCGG98600.09.491801120
CGTATCA531000.09.490427120
CATTAAA382000.09.297353120
GTATCAT511400.08.974322120
ATCATTA446200.08.873917120
TATCATT511050.08.792643120
CCGTATC606100.08.74012120
TGGTCGC883200.08.32784120
CGCCGTA697650.08.255333120
GCCGTAT643450.08.242111120
TCGCCGT793700.08.170908120
GTGGTCG952950.08.007888120
GGTCGCC847800.07.939633120
GGTGGTC1017450.07.9070907120
GTCGCCG845550.07.776286120
ATTAAAA437550.07.6919446120
TCGGTGG1167850.07.371669120
CGGTGGT1105250.07.3712344120
Produced by FastQC (version 0.11.5)