FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12368759
Sequences flagged as poor quality0
Sequence length51-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG60150.011.17239120
AAAAAAA689000.08.743356120
TGGTCGC343500.08.367052120
GGTGGTC404550.08.112949120
GGTCGCC335950.08.055120
TCGGTGG475000.07.958122120
ATCTCGG575900.07.928686120
GTGGTCG369350.07.9114223120
CGGTGGT454750.07.850692120
CTCGGTG505400.07.8356023120
CGCCGTA299200.07.6807013120
CGTATCA248400.07.657224120
GTCGCCG343200.07.570147120
TCTCGGT530100.07.425227120
AGATCTC630550.07.3842416120
GATCTCG612750.07.3049827120
TAGATCT653800.07.195067120
GCCGTAT300400.07.0308275120
TCGCCGT333850.06.919473120
GTGTAGA819450.06.8608956120
Produced by FastQC (version 0.11.5)