FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831974

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831974
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14316386
Sequences flagged as poor quality0
Sequence length51-126
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA590550.07.3251233120
TAGATCT463300.07.200271120
TCTCGGT415500.06.9600496120
GGTGGTC331900.06.7969947120
TGGTCGC282600.06.751361120
AGATCTC459300.06.7012725120
AGTGTAG590250.06.668132120
GTGGTCG312250.06.6675053120
GATCTCG469000.06.652223120
CGGTGGT379900.06.6015105120
CGTATCA210550.06.525542120
CTCGGTG405950.06.5030403120
GTGTAGA587150.06.4274383120
GAGTGTA625950.06.4028473120
GGTCGCC299550.06.349306120
TCGGTGG383750.06.3007607120
TGTAGAT613350.06.2898307120
AGAGTGT668050.06.2777576120
GTAGATC598650.06.2338123120
AAGAGTG723300.06.1632056120
Produced by FastQC (version 0.11.5)