FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12261305
Sequences flagged as poor quality0
Sequence length126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG67400.011.1259575120
TGGTCGC287500.09.598586120
GTGGTCG313400.09.571021120
GTCGCCG294050.09.262366120
GGTGGTC352800.09.029282120
GGTCGCC281500.08.972035120
ATCTCGG515550.08.901801120
CTCGGTG443750.08.638728120
AGATCTC582700.08.503983120
TAGATCT601750.08.503941120
GATCTCG561400.08.495364120
TCTCGGT470250.08.458084120
TCGGTGG418800.08.336881120
GTGTAGA774500.08.125336120
CGCCGTA254850.08.074149120
AGTGTAG804850.08.020189120
AAAAAAA479350.07.9971533120
GTAGATC757450.07.896388120
CGGTGGT411150.07.631127118-119
GCCGTAT254300.07.619797120
Produced by FastQC (version 0.11.5)