FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831990

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831990
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12457912
Sequences flagged as poor quality0
Sequence length64-126
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAAAAAA1291500.015.071331120
GCGTCGG97200.010.185513120
GTATCAT605300.09.942495120
ATCATTA516400.09.899621120
TCATTAA451350.09.478536120
CATTAAA438800.09.435123120
TCTCGGG37850.09.194482120
CGTATCA629050.09.118805120
TATCATT593750.09.0445120
TGGTCGC1041600.08.923097120
GGTCGCC986150.08.64602120
CGCCGTA824250.08.575342120
CCGTATC716950.08.56991120
GCCGTAT771450.08.49337120
GTGGTCG1121400.08.443288120
TCGCCGT932900.08.380589120
ATTAAAA465650.08.298344120
GGTGGTC1206950.08.227613120
CGGTGGT1324900.08.15182120
TTAAAAA446600.08.074598120
Produced by FastQC (version 0.11.5)