FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831992

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831992
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11326412
Sequences flagged as poor quality0
Sequence length55-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG41300.010.022916120
AAAAAAA777950.09.269319120
GGTCGCC371800.08.826183120
GTCGCCG362550.08.670785120
TGGTCGC398350.08.659603120
CGTATCA272350.08.502663120
GTGGTCG432750.08.470306120
TCGCCGT353100.08.342165120
CGCCGTA311900.08.270811120
CCGTATC316300.07.814353120
GGTGGTC477600.07.7502522120
GCCGTAT306600.07.748507120
TCGGTGG546400.07.542947120
ATCTCGG652850.07.489265120
CTCGGTG573750.07.2461205120
TCTCGGT604850.07.240527120
CGGTGGT516700.07.204408118-119
AGATCTC758600.07.1490874120
GTATCAT322850.07.0611887120
GATCTCG704400.06.8134274120
Produced by FastQC (version 0.11.5)