FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004831996

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004831996
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12074306
Sequences flagged as poor quality0
Sequence length50-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT239950.08.293223120
ATCTCGG226250.07.7590823120
AGTGTAG308700.07.6926603120
TCTCGGT198950.07.524393120
AGAGTGT358100.07.2022643120
CTCGGTG203450.07.180665120
TCGGTGG190950.07.084007120
GTAGATC315000.07.080753120
AAGAGTG402100.07.0720143120
GTGTAGA312250.06.9313235120
GGTGGTC167450.06.9292827120
GAGTGTA328450.06.8867617118-119
GGGAAAG553150.06.8472114120
AGATCTC247050.06.8122563118-119
GTGTAGG635800.06.7986774120
TAGGGAA540750.06.7929864120
TGGTCGC137400.06.738296120
GTAGGGA556900.06.7363315120
GTGGTCG149050.06.7359767120
GGTCGCC144450.06.5759068120
Produced by FastQC (version 0.11.5)