FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14737983
Sequences flagged as poor quality0
Sequence length60-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT547550.08.519949120
AGATCTC532650.08.487407120
ATCTCGG492150.08.025406120
GGTGGTC339750.07.9625497120
TGGTCGC287300.07.9514637120
AGTGTAG722700.07.894184120
GTGGTCG318600.07.736369120
TCGGTGG412600.07.722284120
TCTCGGT449050.07.6309614120
GGTCGCC293150.07.6287274120
CTCGGTG440750.07.5427876120
AGAGTGT830950.07.4156303120
CGTATCA213450.07.407279120
GTGTAGA708100.07.3353057120
GAGTGTA774350.07.3288155120
GCGTCGG112500.07.3209453120
GATCTCG535700.07.283199120
CGCCGTA275300.07.206208120
GTAGATC738450.07.0745325120
TGTAGAT738850.07.05443120
Produced by FastQC (version 0.11.5)