FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832014

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832014
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10983531
Sequences flagged as poor quality0
Sequence length67-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGGTCG252300.08.560678120
GGTGGTC274400.07.7618837120
CTCGGTG335100.07.6807866120
GGTCGCC231050.07.660179120
ATCTCGG375150.07.6444426120
TGGTCGC232900.07.573571120
AGATCTC413650.07.542115120
AAAAAAA504350.07.4467235120
GATCTCG409900.07.4354744120
TCTCGGT350100.07.3345685120
CGTATCA182000.07.2852383120
TAGATCT422400.07.26515118-119
TCGGTGG316650.07.237803120
GTGTAGA537250.06.990702120
GAGTGTA578700.06.98762120
CGGTGGT318650.06.8440533118-119
AGTGTAG545900.06.8139896120
GCGTCGG62450.06.7249413120
CGCCGTA216350.06.6554465120
AGAGTGT616650.06.6354213120
Produced by FastQC (version 0.11.5)