FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13853416
Sequences flagged as poor quality0
Sequence length51-126
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGGTGG245950.09.05021120
ATCTCGG284000.08.936215120
GTGGTCG174450.08.838808120
GGTCGCC146750.08.830946120
GATCTCG303500.08.757429120
TGGTCGC153400.08.526341120
AGATCTC317300.08.357642120
TCTCGGT256700.08.273726118-119
TAGATCT323800.08.152811120
CTCGGTG256300.08.146334120
GTGTAGA432800.07.9709888120
GCGTCGG48200.07.8419685120
GTAGATC406450.07.764441120
AGTGTAG440750.07.731924120
GAGTGTA473850.07.559012120
GGTGGTC204150.07.4941497120
AGAGTGT517000.07.485154120
GTCGCCG154400.07.344227120
AAGAGTG573850.07.099095120
CGGTGGT244950.07.029688120
Produced by FastQC (version 0.11.5)