FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832032

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832032
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12034944
Sequences flagged as poor quality0
Sequence length126
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGATCTC338800.08.165479120
AGTGTAG445650.08.079443120
TAGATCT336550.07.852902118-119
ATCTCGG340000.07.7660084120
TGGTCGC214900.07.427956120
TCTCGGT305450.07.367417120
CCCCCCG26100.07.35614971
GTGTAGA444550.07.329989120
AAGAGTG562950.07.248751120
GAGTGTA478000.07.2062297120
GTAGATC457400.07.2027826120
TCGGTGG292100.07.190524120
GGTGGTC245400.07.1894693120
TGTAGAT451150.07.1562486120
AGAGTGT513600.07.068943120
CGTATCA133500.07.0124125120
GATCTCG383500.06.885118120
AAAAAAA310050.06.8516574120
GTGGTCG242900.06.6952357120
CGGTGGT283400.06.246637120
Produced by FastQC (version 0.11.5)