FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832048

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832048
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15696258
Sequences flagged as poor quality0
Sequence length61-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGGTCGC349750.010.0531025120
GTGGTCG387650.09.875091120
GGTGGTC444500.09.476011120
TCTCGGT596150.09.410577120
TAGATCT770800.08.827374120
GATCTCG703750.08.824339120
AGATCTC743300.08.806855120
GGTCGCC332600.08.803549120
ATCTCGG644550.08.703926120
CTCGGTG564500.08.460758120
GTGTAGA1000250.08.37408120
TCGGTGG531000.08.305256120
CGCCGTA300600.08.303564120
CGGTGGT516050.08.266811120
AGTGTAG1042200.08.198212120
GTCGCCG339750.08.159108120
TCGCCGT350450.07.875751120
GTAGATC970950.07.7245526120
AGAGTGT1202250.07.660794120
GCGTCGG72500.07.61395120
Produced by FastQC (version 0.11.5)