FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832068

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832068
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13083164
Sequences flagged as poor quality0
Sequence length54-126
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT269350.07.7967706120
AGATCTC272150.07.4960814120
CTCGGTG237050.07.492305120
GTGTAGA369500.07.339859120
GTAGATC354650.07.224231120
AGTGTAG362450.07.2011995120
GAGTGTA383550.07.1335645120
GGTGGTC198000.07.0911126120
GCGTCGG72850.07.0008874120
TCTCGGT241300.06.9624867120
GATCTCG285900.06.8837233120
GGTCGCC173250.06.718807120
ATCTCGG265800.06.6480465118-119
GTGGTCG183950.06.621554120
TGTAGGG658500.06.597120
TCGGTGG236950.06.5585337120
TGGTCGC162450.06.5375834118-119
AGAGTGT416150.06.4161396118-119
TGTAGAT396100.06.407656120
TAGGGAA604900.06.2888227120
Produced by FastQC (version 0.11.5)