FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832072

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832072
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14283682
Sequences flagged as poor quality0
Sequence length80-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGATCT227650.08.837626120
AGATCTC222050.08.60072120
AGTGTAG328550.08.317033120
GATCTCG216200.08.305656120
GAGTGTA355700.08.222494120
AGAGTGT386500.08.095556120
GTAGATC337400.07.814081120
ATCTCGG223200.07.7761054120
GTAGGGA641450.07.7147684120
AAGAGTG443100.07.6713743120
GTGTAGA331550.07.662135120
TGGTCGC137000.07.3645663120
TGTAGGG675000.07.3580074120
TCTCGGT202100.07.1913023120
CTCGGTG192800.07.1643906120
GTGTAGG736950.07.1387897120
GTCGTGT863600.07.1141243120
CGTGTAG779050.07.0922003120
TAGGGAA621200.06.970474120
TCGTGTA823850.06.9033566120
Produced by FastQC (version 0.11.5)