FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832073

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832073
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14283682
Sequences flagged as poor quality0
Sequence length50-126
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCACAC116800.061.642265120
GAGCACA178200.042.46222120
AGAGCAC236700.033.544758120
AAGAGCA391100.021.369493120
GAAGAGC434450.018.9314120
GGAAGAG556600.015.436035120
TCGGAAG648950.014.019317120
CGGAAGA679350.013.717923120
GATCGGA727100.013.025874120
ATCGGAA762300.012.011724118-119
AGATCGG808600.011.869462120
TAGATCG234750.011.750601120
CTAGATC54600.010.89217120
GAGATCG285100.010.097023120
TTAGATC88750.09.1960335120
TGAGATC113400.08.9266120
CAGATCG260300.08.920128120
AAGATCG262150.08.732155118-119
GTAGATC68650.07.680849118-119
ATAGATC116950.07.4514728118-119
Produced by FastQC (version 0.11.5)