FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004832084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004832084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17682822
Sequences flagged as poor quality0
Sequence length51-126
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG104550.010.157695120
GTGGTCG358150.08.393029120
AGATCTC597550.08.123072120
TGGTCGC323100.08.022186120
GGTGGTC388450.07.5993414120
TAGATCT612200.07.556262120
ATCTCGG556000.07.553865120
CGGTGGT461550.07.53972120
TCGGTGG470150.07.4911356120
CTCGGTG483450.07.4836197120
GATCTCG590050.07.412841120
TCTCGGT508150.07.3678136120
GTGTAGA789450.07.326531120
GTAGATC798600.07.3026915120
GGTCGCC330700.07.275388120
TGTAGAT827700.07.256164120
AGAGTGT925900.07.1605134120
AGTGTAG811550.07.149195120
GAGTGTA862800.07.00965120
CGTATCA261100.06.8938265120
Produced by FastQC (version 0.11.5)